bluepyemodel.model.model_configuration

Model configuration related functions

Functions

configure_model(access_point, morphology_name)

Task of creating and saving a neuron model configuration.
configure_model(access_point, morphology_name, morphology_path=None, morphology_format=None, use_gene_data=True)

Task of creating and saving a neuron model configuration.

Parameters:

  • access_point (DataAccessPoint) – access point to the emodel data

  • morphology_name (str) – name of the morphology on which to build the neuron model. This morphology has to be available in the directory “./morphology” if using the local access point or on Nexus if using the Nexus access point.

  • morphology_path (str) – path to the morphology file

  • morphology_format (str) – format of the morphology, can be ‘asc’ or ‘swc’. Optional if morphology_path was provided.

  • use_gene_data (bool) – should the configuration be initialized using gene data. If False, the configuration will be empty.